Class Specialization
AAGroupsDayhoff
Compressed amino acid alphabet (Dayhoff).
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AAGroupsDayhoff | |||||||||||||
Specialization of
Implements
Metafunctions
| Tests type to be simple. (SimpleType) | |
| The spec of a class. (SimpleType) | |
| Type of the items in the container. (SimpleType) |
Functions
| Assigns one object to another object. (SimpleType) | |
| Maps an alphabet 1-to-1 to the interval [0..ValueSize). (SimpleType) |
Remarks
The ValueSize of AAGroupsDayhoff is 7.
The groups are defined in the following way: "agjopst"=0, "ilmv"=1, "bdenqz"=2, "hkr"=3, "fwy"=4, "c"=5, all others = 6
Objects of type AAGroupsDayhoff cannot be converted into other types.
See Also
SeqAn - Sequence Analysis Library - www.seqan.de