| Function multiLocalAlignment Computes multiple local alignments of two sequences. multiLocalAlignment(graph, edgeMap, score, numAlign, tag) Parameters
graph | The alignment graph having 2 sequences. Types: Alignment Graph
edgeMap | An edge map of pairs of integers. The first number is the id of the local alignment, the second one the score of the local alignment.
score | The score values to be used for computing the alignment. Types: Score
numAlign | The desired number of local alignments to compute.
tag | A tag indicating the alignment algorithm to use Remarks: SmithWatermanIsland or SmithWatermanClump
Return Values void SeqAn - Sequence Analysis Library - www.seqan.de