| Function alignment Returns an alignment of the occurences of the representative substring in the index text. alignment(iterator) Parameters
iterator | An iterator of a Suffix Tree. Types: VSTree Iterator
Return Values A local alignment corresponding to the seed of the iterator. Remarks The representative must uniquely occur in every sequence (e.g. in MUMs), otherwise the seed returned is one many. SeqAn - Sequence Analysis Library - www.seqan.de