| Class Specialization PMode Represents the P computation scheme for handling "zero" probabilities.
Pseudocount
PMode
Pseudocount<TValue, PMode> Parameters
TValue | The type of sequence which is considered. Types: AminoAcid, Dna
Specialization of Pseudocount Metafunctions
Value | Type of the items in the container. (Pseudocount)
Functions
convertSetOfPatternsToProfile | Converts a set of sequence patterns into a profile. (Pseudocount)
normalize | Determines the normalized frequencies. (Pseudocount)
Remarks The P mode computation scheme distributes the pseudocounts among the various residue according to their background probabilities. SeqAn - Sequence Analysis Library - www.seqan.de